Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015900169.1_cds_XP_016450208.1_44682
CDS Infomation

[gene=LOC107775050] [db_xref=GeneID:107775050] [protein=IQ domain-containing protein IQM1-like] [protein_id=XP_016450208.1] [location=complement(join(6372..6827,6940..7041,7286..7516,7799..7886,8011..8099,8215..8395,8635..8984))] [gbkey=CDS]
Sequence

ATGACTGTGCGATCGAATAGTTTTAAAGGAACACATTTGGAAACAATAATCCAATCAAAT
GGTGTCGATAAGATGACACGAAAGAATTCGATAAATTTAAGGAACTGTGAACCGAAGAAG
CTGATGCTAGAGACAACTCTATCATTCAAGAATTTGATTCAAGACATAAATATATCAGAA
TGGAATGAAACTAAGACAAGAGCAGCTTCACTACACGAGCCTTCGATTCTGTTTTCTCCG
CATCCTGTTAGCGAGCTCGATGCTGCTGCTGTTAAGCTACAAAAAGTATACAAGAGTTAT
AGGACGAGAAGAAATCTCGCGGATTGTGCTGTTGTGGTTGAAGAACTATGGTGGAAGGCT
TTGGATTTTGCAGCTCTAAAAAGGAGTTCTGTTTCTTTCTTTAACGGGGAGAAACCAGAA
ACTGCTGTATCGCGGTGGGCTAGAGCGCGTACAAGAGCTGCTATAGTTGGAAAAGGATTG
TCAAAAGATGAAAAAGCTCAAAAACTTGCTCTGCAGCATTGGTTAGAAGCTATTGATCCA
CGACATCGGTATGGACACAACTTACACTTTTACTATGATGTGTGGTTTGAAAGCGAAAGC
TCTCAACCTTTCTTCTACTGGTTGGATGTTGGAGATGGGAAAGAAATCAATCTTGAGAAG
TGTCCAAGAACCAATCTGCAGCATCAATGCATCAAATATCTCGGGCCGAAAGAGCGCGAA
TCGTATGAAGTAGTTATTCAAGATGGGAAACTTGTCTATAAACAAAGTGGTATCTTTGTG
GAGACAGTAGAAGGATCAAAGTGGATTTTTGTTCTTAGCACAACAAGAACATTATATGTA
GGAAAAAAGAAGAAAGGTGTGTTTCAACATTCGAGTTTTCTATCCGGTGGAGCGATTACT
GCTGCTGGAAGACTGGTTTCTCATGGTGGTATTTTGGAGGCTATTTGGCCATATAGCGGG
CACTATCACCCCACGGAAGAGAACTTCAGGGAATTCATTGGCTTCCTCGAGGAGCACAAC
GTTGATCTTACAAACGTTAAGAGATGTTCAGTTGATGATGATGATCTTTCGTTTAAAGTT
AATAACGAGGGCTCAAATCGCCAACCACCTGTCCATCATTCTGTTGCAAAAGAATCACCC
AAGAGAAGCGTTTCTGCTGTAAATGATCAAACTGAGGCGAAAGCAGCCACAACAGACAAT
GATCGTGAAGACATCATCAATAACAAGACACAATCATCGTTTAGCTTTGCTAAACGTTTA
TCTCGCAAATGGTCAACAGGAAATGGACCTCGTATTGGCTGTGTTAGGGACTACCCTACA
GAATTACAATTCCGAGCACTTGAACAAGTTAACTTGTCACCTCGGGTGGCTAACGGAGGT
TTCAACATATATGGTCCGATCCCCTCACCAAGGCCAAGCCCGAAGATTCGGCTTTCTCCT
AGGATTGCGCATATGGGATTACCTAGTCCAAGGACACCTATTTCAGCAGCTAACTAA

Peptide Sequence

PEP ID

XP_016450208.1
PEP Infomation

PREDICTED: IQ domain-containing protein IQM1-like [Nicotiana tabacum]
Sequence

MTVRSNSFKGTHLETIIQSNGVDKMTRKNSINLRNCEPKKLMLETTLSFKNLIQDINISE
WNETKTRAASLHEPSILFSPHPVSELDAAAVKLQKVYKSYRTRRNLADCAVVVEELWWKA
LDFAALKRSSVSFFNGEKPETAVSRWARARTRAAIVGKGLSKDEKAQKLALQHWLEAIDP
RHRYGHNLHFYYDVWFESESSQPFFYWLDVGDGKEINLEKCPRTNLQHQCIKYLGPKERE
SYEVVIQDGKLVYKQSGIFVETVEGSKWIFVLSTTRTLYVGKKKKGVFQHSSFLSGGAIT
AAGRLVSHGGILEAIWPYSGHYHPTEENFREFIGFLEEHNVDLTNVKRCSVDDDDLSFKV
NNEGSNRQPPVHHSVAKESPKRSVSAVNDQTEAKAATTDNDREDIINNKTQSSFSFAKRL
SRKWSTGNGPRIGCVRDYPTELQFRALEQVNLSPRVANGGFNIYGPIPSPRPSPKIRLSP
RIAHMGLPSPRTPISAAN

Transcript Sequence

Gene sequence data has not been registered.